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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs10978109 chr9:1002476 G/T HNRNPCL1 chr1:12907261-12908578:- 0.46 7.59 2.22E-11 Box Plot
THYM rs10978110 chr9:1002489 C/T HNRNPCL1 chr1:12907261-12908578:- 0.46 7.59 2.22E-11 Box Plot
THYM rs111404933 chr17:44821987 G/GA LOC644172 chr17:43677491-43679748:- 1.12 11.64 5.56E-20 Box Plot
THYM rs111404933 chr17:44821987 G/GA LRRC37A4 chr17:43578685-43595516:- -0.6 -9.43 2.69E-15 Box Plot
THYM rs112577104 chr13:52533466 G/C CUL7 chr6:43005355-43021683:- 1.14 7.22 1.31E-10 Box Plot
THYM rs1128287 chr5:176728458 G/T LOC388955 chr2:63849182-63850159:- 0.69 11.05 9.76E-19 Box Plot
THYM rs11342604 chr5:169762142 GA/G GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs113562005 chr17:44818954 C/CA LOC644172 chr17:43677491-43679748:- 1.12 12.01 9.27E-21 Box Plot
THYM rs113562005 chr17:44818954 C/CA LRRC37A4 chr17:43578685-43595516:- -0.61 -9.95 2.12E-16 Box Plot
THYM rs114588746 chr16:30053597 T/C ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs11464318 chr19:2866830 C/CA HNRNPCL1 chr1:12907261-12908578:- -0.61 -7.86 6.01E-12 Box Plot
THYM rs11507274 chr9:78896906 C/G DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs115203594 chr3:13308602 G/A GPR149 chr3:154055461-154147504:- 0.67 7.61 1.93E-11 Box Plot
THYM rs115518563 chr16:30055603 G/A ZNF254 chr19:24216207-24312763:+ 0.69 7.46 4.08E-11 Box Plot
THYM rs116878064 chr16:30063549 C/T ZNF254 chr19:24216207-24312763:+ 0.7 7.27 1.03E-10 Box Plot